── Attaching core tidyverse packages ──────────────────────── tidyverse 2.0.0 ──
✔ dplyr 1.1.3 ✔ readr 2.1.4
✔ forcats 1.0.0 ✔ stringr 1.5.0
✔ ggplot2 3.4.4 ✔ tibble 3.2.1
✔ lubridate 1.9.3 ✔ tidyr 1.3.0
✔ purrr 1.0.2
── Conflicts ────────────────────────────────────────── tidyverse_conflicts() ──
✖ dplyr::filter() masks stats::filter()
✖ dplyr::lag() masks stats::lag()
ℹ Use the conflicted package (<http://conflicted.r-lib.org/>) to force all conflicts to become errorsModel diagnostics
1 Intro
Here we show extensive model diagnostics for all models performed in phneols - cortisol - CBCL analysis.
2 Ewas
# A tibble: 1 × 3
compound pool score
<chr> <chr> <chr>
1 bp3 pool1 internalizing_sqrt
# A tibble: 1 × 3
compound pool score
<chr> <chr> <chr>
1 bp3 pool1 externalizing_sqrt
# A tibble: 1 × 3
compound pool score
<chr> <chr> <chr>
1 bpa pool1 internalizing_sqrt
# A tibble: 1 × 3
compound pool score
<chr> <chr> <chr>
1 bpa pool1 externalizing_sqrt
# A tibble: 1 × 3
compound pool score
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1 etpa pool1 internalizing_sqrt
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compound pool score
<chr> <chr> <chr>
1 etpa pool1 externalizing_sqrt
# A tibble: 1 × 3
compound pool score
<chr> <chr> <chr>
1 mepa pool1 internalizing_sqrt
# A tibble: 1 × 3
compound pool score
<chr> <chr> <chr>
1 mepa pool1 externalizing_sqrt
# A tibble: 1 × 3
compound pool score
<chr> <chr> <chr>
1 prpa pool1 internalizing_sqrt
# A tibble: 1 × 3
compound pool score
<chr> <chr> <chr>
1 prpa pool1 externalizing_sqrt
# A tibble: 1 × 3
compound pool score
<chr> <chr> <chr>
1 trcs pool1 internalizing_sqrt
# A tibble: 1 × 3
compound pool score
<chr> <chr> <chr>
1 trcs pool1 externalizing_sqrt
# A tibble: 1 × 3
compound pool score
<chr> <chr> <chr>
1 bp3 pool2 internalizing_sqrt
# A tibble: 1 × 3
compound pool score
<chr> <chr> <chr>
1 bp3 pool2 externalizing_sqrt
# A tibble: 1 × 3
compound pool score
<chr> <chr> <chr>
1 etpa pool2 internalizing_sqrt
# A tibble: 1 × 3
compound pool score
<chr> <chr> <chr>
1 etpa pool2 externalizing_sqrt
# A tibble: 1 × 3
compound pool score
<chr> <chr> <chr>
1 trcs pool2 internalizing_sqrt
# A tibble: 1 × 3
compound pool score
<chr> <chr> <chr>
1 trcs pool2 externalizing_sqrt
# A tibble: 1 × 3
compound pool score
<chr> <chr> <chr>
1 bps_cat pool1 internalizing_sqrt
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compound pool score
<chr> <chr> <chr>
1 bps_cat pool1 externalizing_sqrt
# A tibble: 1 × 3
compound pool score
<chr> <chr> <chr>
1 bupa_cat pool1 internalizing_sqrt
# A tibble: 1 × 3
compound pool score
<chr> <chr> <chr>
1 bupa_cat pool1 externalizing_sqrt
# A tibble: 1 × 3
compound pool score
<chr> <chr> <chr>
1 bps_cat pool2 internalizing_sqrt
# A tibble: 1 × 3
compound pool score
<chr> <chr> <chr>
1 bps_cat pool2 externalizing_sqrt
# A tibble: 1 × 3
compound pool score
<chr> <chr> <chr>
1 bupa_cat pool2 internalizing_sqrt
# A tibble: 1 × 3
compound pool score
<chr> <chr> <chr>
1 bupa_cat pool2 externalizing_sqrt
# A tibble: 1 × 3
compound pool score
<chr> <chr> <chr>
1 bpa_quart pool2 internalizing_sqrt
# A tibble: 1 × 3
compound pool score
<chr> <chr> <chr>
1 bpa_quart pool2 externalizing_sqrt
# A tibble: 1 × 3
compound pool score
<chr> <chr> <chr>
1 mepa_quart pool2 internalizing_sqrt
# A tibble: 1 × 3
compound pool score
<chr> <chr> <chr>
1 mepa_quart pool2 externalizing_sqrt
# A tibble: 1 × 3
compound pool score
<chr> <chr> <chr>
1 prpa_quart pool2 internalizing_sqrt
# A tibble: 1 × 3
compound pool score
<chr> <chr> <chr>
1 prpa_quart pool2 externalizing_sqrt
3 Ewas by cohort
# A tibble: 1 × 4
compound pool score data
<chr> <chr> <chr> <list>
1 bp3 pool1 internalizing_sqrt <tibble [1,024 × 16]>
# A tibble: 1 × 4
compound pool score data
<chr> <chr> <chr> <list>
1 bp3 pool1 externalizing_sqrt <tibble [1,024 × 16]>
# A tibble: 1 × 4
compound pool score data
<chr> <chr> <chr> <list>
1 bpa pool1 internalizing_sqrt <tibble [1,024 × 16]>
# A tibble: 1 × 4
compound pool score data
<chr> <chr> <chr> <list>
1 bpa pool1 externalizing_sqrt <tibble [1,024 × 16]>
# A tibble: 1 × 4
compound pool score data
<chr> <chr> <chr> <list>
1 etpa pool1 internalizing_sqrt <tibble [1,024 × 16]>
# A tibble: 1 × 4
compound pool score data
<chr> <chr> <chr> <list>
1 etpa pool1 externalizing_sqrt <tibble [1,024 × 16]>
# A tibble: 1 × 4
compound pool score data
<chr> <chr> <chr> <list>
1 mepa pool1 internalizing_sqrt <tibble [1,024 × 16]>
# A tibble: 1 × 4
compound pool score data
<chr> <chr> <chr> <list>
1 mepa pool1 externalizing_sqrt <tibble [1,024 × 16]>
# A tibble: 1 × 4
compound pool score data
<chr> <chr> <chr> <list>
1 prpa pool1 internalizing_sqrt <tibble [1,024 × 16]>
# A tibble: 1 × 4
compound pool score data
<chr> <chr> <chr> <list>
1 prpa pool1 externalizing_sqrt <tibble [1,024 × 16]>
# A tibble: 1 × 4
compound pool score data
<chr> <chr> <chr> <list>
1 trcs pool1 internalizing_sqrt <tibble [1,024 × 16]>
# A tibble: 1 × 4
compound pool score data
<chr> <chr> <chr> <list>
1 trcs pool1 externalizing_sqrt <tibble [1,024 × 16]>
# A tibble: 1 × 4
compound pool score data
<chr> <chr> <chr> <list>
1 bp3 pool2 internalizing_sqrt <tibble [1,024 × 16]>
# A tibble: 1 × 4
compound pool score data
<chr> <chr> <chr> <list>
1 bp3 pool2 externalizing_sqrt <tibble [1,024 × 16]>
# A tibble: 1 × 4
compound pool score data
<chr> <chr> <chr> <list>
1 etpa pool2 internalizing_sqrt <tibble [1,024 × 16]>
# A tibble: 1 × 4
compound pool score data
<chr> <chr> <chr> <list>
1 etpa pool2 externalizing_sqrt <tibble [1,024 × 16]>
# A tibble: 1 × 4
compound pool score data
<chr> <chr> <chr> <list>
1 trcs pool2 internalizing_sqrt <tibble [1,024 × 16]>
# A tibble: 1 × 4
compound pool score data
<chr> <chr> <chr> <list>
1 trcs pool2 externalizing_sqrt <tibble [1,024 × 16]>
# A tibble: 1 × 4
compound pool score data
<chr> <chr> <chr> <list>
1 bps_cat pool1 internalizing_sqrt <tibble [1,024 × 16]>
# A tibble: 1 × 4
compound pool score data
<chr> <chr> <chr> <list>
1 bps_cat pool1 externalizing_sqrt <tibble [1,024 × 16]>
# A tibble: 1 × 4
compound pool score data
<chr> <chr> <chr> <list>
1 bupa_cat pool1 internalizing_sqrt <tibble [1,024 × 16]>
# A tibble: 1 × 4
compound pool score data
<chr> <chr> <chr> <list>
1 bupa_cat pool1 externalizing_sqrt <tibble [1,024 × 16]>
# A tibble: 1 × 4
compound pool score data
<chr> <chr> <chr> <list>
1 bps_cat pool2 internalizing_sqrt <tibble [1,024 × 16]>
# A tibble: 1 × 4
compound pool score data
<chr> <chr> <chr> <list>
1 bps_cat pool2 externalizing_sqrt <tibble [1,024 × 16]>
# A tibble: 1 × 4
compound pool score data
<chr> <chr> <chr> <list>
1 bupa_cat pool2 internalizing_sqrt <tibble [1,024 × 16]>
# A tibble: 1 × 4
compound pool score data
<chr> <chr> <chr> <list>
1 bupa_cat pool2 externalizing_sqrt <tibble [1,024 × 16]>
# A tibble: 1 × 4
compound pool score data
<chr> <chr> <chr> <list>
1 bpa_quart pool2 internalizing_sqrt <tibble [1,024 × 16]>
# A tibble: 1 × 4
compound pool score data
<chr> <chr> <chr> <list>
1 bpa_quart pool2 externalizing_sqrt <tibble [1,024 × 16]>
# A tibble: 1 × 4
compound pool score data
<chr> <chr> <chr> <list>
1 mepa_quart pool2 internalizing_sqrt <tibble [1,024 × 16]>
# A tibble: 1 × 4
compound pool score data
<chr> <chr> <chr> <list>
1 mepa_quart pool2 externalizing_sqrt <tibble [1,024 × 16]>
# A tibble: 1 × 4
compound pool score data
<chr> <chr> <chr> <list>
1 prpa_quart pool2 internalizing_sqrt <tibble [1,024 × 16]>
# A tibble: 1 × 4
compound pool score data
<chr> <chr> <chr> <list>
1 prpa_quart pool2 externalizing_sqrt <tibble [1,024 × 16]>
# A tibble: 1 × 4
compound pool score data
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1 <NA> <NA> <NA> <NULL>
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compound pool score data
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1 <NA> <NA> <NA> <NULL>
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compound pool score data
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1 <NA> <NA> <NA> <NULL>
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compound pool score data
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1 <NA> <NA> <NA> <NULL>
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compound pool score data
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1 <NA> <NA> <NA> <NULL>
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compound pool score data
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1 <NA> <NA> <NA> <NULL>
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compound pool score data
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1 <NA> <NA> <NA> <NULL>
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compound pool score data
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1 <NA> <NA> <NA> <NULL>
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compound pool score data
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1 <NA> <NA> <NA> <NULL>
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compound pool score data
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1 <NA> <NA> <NA> <NULL>
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compound pool score data
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1 <NA> <NA> <NA> <NULL>
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compound pool score data
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1 <NA> <NA> <NA> <NULL>
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compound pool score data
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1 <NA> <NA> <NA> <NULL>
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1 <NA> <NA> <NA> <NULL>
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compound pool score data
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1 <NA> <NA> <NA> <NULL>
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compound pool score data
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1 <NA> <NA> <NA> <NULL>
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compound pool score data
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1 <NA> <NA> <NA> <NULL>
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compound pool score data
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1 <NA> <NA> <NA> <NULL>
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compound pool score data
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1 <NA> <NA> <NA> <NULL>
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compound pool score data
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1 <NA> <NA> <NA> <NULL>
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compound pool score data
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1 <NA> <NA> <NA> <NULL>
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compound pool score data
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1 <NA> <NA> <NA> <NULL>
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compound pool score data
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1 <NA> <NA> <NA> <NULL>
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compound pool score data
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1 <NA> <NA> <NA> <NULL>
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compound pool score data
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1 <NA> <NA> <NA> <NULL>
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compound pool score data
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1 <NA> <NA> <NA> <NULL>
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compound pool score data
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1 <NA> <NA> <NA> <NULL>
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compound pool score data
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1 <NA> <NA> <NA> <NULL>
# A tibble: 1 × 4
compound pool score data
<chr> <chr> <chr> <list>
1 <NA> <NA> <NA> <NULL>
# A tibble: 1 × 4
compound pool score data
<chr> <chr> <chr> <list>
1 <NA> <NA> <NA> <NULL>
# A tibble: 1 × 4
compound pool score data
<chr> <chr> <chr> <list>
1 <NA> <NA> <NA> <NULL>
# A tibble: 1 × 4
compound pool score data
<chr> <chr> <chr> <list>
1 <NA> <NA> <NA> <NULL>